研究
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突出研究
Re-evaluating evidence for adaptive mutation rate variation
Nature
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01 Jan 2023
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manual-wang-2023-reevaluating
所有研究
2023
Re-evaluating evidence for adaptive mutation rate variation
Nature
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01 Jan 2023
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manual-wang-2023-reevaluating
2022
In rice splice variants that restore the reading frame after frameshifting indel introduction are common, often induced by the indels and sometimes lead to organism-level rescue
PLOS Genetics
·
01 Jan 2022
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manual-jia-2022-rice-splice
2021
Ancient rapid functional differentiation and fixation of the duplicated members in riceDofgenes after whole genome duplication
The Plant Journal
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15 Oct 2021
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doi:10.1111/tpj.15516
Somatic Mutation Analysis in Salix suchowensis Reveals Early-Segregated Cell Lineages
Molecular Biology and Evolution
·
25 Sep 2021
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doi:10.1093/molbev/msab286
Mitotic gene conversion can be as important as meiotic conversion in driving genetic variability in plants and other species without early germline segregation
PLoS Biol
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01 Jan 2021
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manual-jia-2021-mitotic-gene
2020
Repeat-induced point mutation in Neurospora crassa causes the highest known mutation rate and mutational burden of any cellular life
Genome Biology
·
16 Jun 2020
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doi:10.1186/s13059-020-02060-w
Pleiotropic changes revealed by in situ recovery of the semi-dwarf gene sd1 in rice
Journal of Plant Physiology
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01 May 2020
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doi:10.1016/j.jplph.2020.153141
Pleiotropic Changes Revealed by in Situ Recovery of the Semi-Dwarf Gene Sd1 in Rice
Journal of Plant Physiology
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01 Jan 2020
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manual-jia-2020-pleiotropic-changes
CRISPR-based assessment of genomic structure in the conserved SQUAMOSA promoter-binding-like gene clusters in rice
Plant J
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01 Jan 2020
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manual-jiang-2020-crispr-based
2019
Large-scale identification and functional analysis of
NLR
genes in blast resistance in the Tetep rice genome sequence
Proceedings of the National Academy of Sciences
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26 Aug 2019
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doi:10.1073/pnas.1910229116
CRISPR-Based Assessment of Gene Specialization in the Gibberellin Metabolic Pathway in Rice
Plant Physiology
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03 Jun 2019
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doi:10.1104/pp.19.00328
Different Knockout Genotypes of OsIAA23 in Rice Using CRISPR/Cas9 Generating Different Phenotypes
Plant Mol Biol
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01 Jan 2019
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manual-jiang-2019-different-knockout
The architecture of intra-organism mutation rate variation in plants
PLOS Biology
·
01 Jan 2019
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manual-chen-2019-architecture
2018
High‐resolution insight into recombination events at the SD 1 locus in rice
The Plant Journal
·
18 Dec 2018
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doi:10.1111/tpj.14154
Liriodendron genome sheds light on angiosperm phylogeny and species–pair differentiation
Nature Plants
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17 Dec 2018
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doi:10.1038/s41477-018-0323-6
Phylogenetic and CRISPR/Cas9 Studies in Deciphering the Evolutionary Trajectory and Phenotypic Impacts of Rice ERECTA Genes
Frontiers in Plant Science
·
01 Jan 2018
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manual-zhang-2018-phylogenetic
Tetrad Analysis in Plants and Fungi Finds Large Differences in Gene Conversion Rates but No GC Bias
Nature Ecology & Evolution
·
01 Jan 2018
·
manual-liu-2018-tetrad-analysis
Identifying a Large Number of High-Yield Genes in Rice by Pedigree Analysis, Whole-Genome Sequencing, and CRISPR-Cas9 Gene Knockout
PNAS
·
01 Jan 2018
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manual-huang-2018-identifying
2017
Selective Sweep with Significant Positive Selection Serves as the Driving Force for the Differentiation of Japonica and Indica Rice Cultivars
BMC Genomics
·
01 Jan 2017
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manual-yuan-2017-selective-sweep
Direct determination of the mutation rate in the bumblebee reveals evidence for weak recombination-associated mutation and an approximate rate constancy in insects
Mol Biol Evol
·
01 Jan 2017
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manual-liu-2017-direct-determination
2016
Insertions/deletions-associated nucleotide polymorphism in Arabidopsis thaliana
Frontiers in Plant Science
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01 Jan 2016
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manual-guo-2016-insertions-deletions
Insertion DNA accelerates meiotic inerchromosomal recombination in Arabidopsis thaliana
Mol Biol Evol
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01 Jan 2016
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manual-sun-2016-insertion-dna
Mutation rate analysis via parent-progeny sequencing of the perennial peach II: No evidence for recombination-associated mutation
P Roy Soc B-Biol Sci
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01 Jan 2016
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manual-wang-2016-mutation-rate-peach-ii
Mutation rate analysis via parent-progeny sequencing of the perennial peach I. A low rate in woody perennials and a higher mutagenicity in hybrids
P Roy Soc B-Biol Sci
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01 Jan 2016
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manual-xie-2016-mutation-rate-peach-i
Dissimilar Manifestation of Heterosis in Super Hybrid Rice at Early-Tillering Stage under Nutrient-Deficient and Nutrient-Sufficient Condition
Plant Physiol
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01 Jan 2016
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manual-gu-2016-dissimilar-manifestation
2015
Relationship between Amino Acid Usage and Amino Acid Evolution in Primates
Gene
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01 Jan 2015
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manual-liu-2015-amino-acid-usage
Ancient origins and rapid evolution of RB/Rpi-blb1 locus in Solanaceae
Mol Genet Genomics
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01 Jan 2015
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manual-xie-2015-ancient-origins
Extreme expansion of NBS-encoding genes in Rosaceae
BMC Genetics
·
01 Jan 2015
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manual-jia-2015-extreme-expansion
Dynamic evolution of NBS-LRR genes in bread wheat and its progenitors
Mol Genet Genomics
·
01 Jan 2015
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manual-gu-2015-dynamic-evolution-nbs-lrr
High genetic abundance of Rpi-blb2/Mi-1.2/Cami gene family in Solanaceae
BMC Evol Biol
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01 Jan 2015
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manual-zhao-2015-high-genetic-abundance
GC-content of synonymous codons profoundly infulences amino acid usage
G3 : Genes|Genomes|Genetics
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01 Jan 2015
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manual-li-2015-gc-content
Novel rice blast resistance genes cloning from two rapidly evolving NBS-LRR gene families in rice
Plant Mol Biol
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01 Jan 2015
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manual-guo-2015-novel-rice-blast
Widely distributed hot and cold spots in meiotic recombination as shown by sequencing of rice F2 plants
New Phytologist
·
01 Jan 2015
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manual-si-2015-widely-distributed-hot-spots
Causes and consequences of crossing-over evidenced via a high-resolution recombinational landscape of the honey bee
Genome Biology
·
01 Jan 2015
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manual-liu-2015-gene-conversion-honeybee
A genome-wide survey reveals abundant rice blast R-genes in resistant cultivars
Plant J
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01 Jan 2015
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manual-zhang-2015-rice-blast-r-genes
Parent-progeny sequencing indicates higher mutation rates in heterozygotes
Nature
·
01 Jan 2015
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manual-yang-2015-higher-mutation-rates
2014
Allele-mining of rice blast resistance genes at AC134922 locus
BBRC
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01 Jan 2014
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manual-wang-2014-allele-mining
Rapid evolution of avirulence genes in rice blast fungus Magnaporthe oryzae
BMC Genetics
·
01 Jan 2014
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manual-huang-2014-rapid-evolution
2013
Functional requirements driving the gene duplication in 12 Drosophila species
BMC Genomics
·
01 Jan 2013
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manual-zhong-2013-functional-requirements
Rapidly evolving R genes in diverse grass species confer resistance to rice blast disease
PNAS
·
01 Jan 2013
·
manual-yang-2013-rapidly-evolving-r-genes
2012
Recent duplications drive the rapid diversification of trypsin genes in 12 Drosophila
Genetica
·
01 Jan 2012
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manual-li-2012-recent-duplications
Heterogeneous evolutionary rates of Pi2/9 genes in rice lines
BMC Genetics
·
01 Jan 2012
·
manual-wu-2012-heterogeneous-rates
Genome-wide survey of pseudogenes in 80 fully re-sequenced Arabidopsis thaliana accessions
Plos One
·
01 Jan 2012
·
manual-wang-2012-genome-wide
Variation of presence/absence genes among Arabidopsis populations
BMC Evol Biol
·
01 Jan 2012
·
manual-tan-2012-variation-presence
Tracing the origin and evolutionary history of plant nucleotide-binding site-leucine-rich repeat (NBS-LRR) genes
New Phytologist
·
01 Jan 2012
·
manual-yue-2012-tracing-origin
Great majority of recombination events in Arabidopsis are gene conversion events
PNAS
·
01 Jan 2012
·
manual-yang-2012-gene-conversion-events
2011
Relative evolutionary rates of NBS-encoding genes revealed by soybean segmental duplication
Mol Genet Genomics
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01 Jan 2011
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manual-zhang-2011-relative-evolutionary-rates
Rapid copy number expansion and recent recruitment of domains in S-receptor kinase-like genes contribute to the origin of self-incompatibility
FEBS J
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01 Jan 2011
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manual-zhang-2011-rapid-copy-number
Increased complexity of gene structure and base composition in vertebrates
Journal of Genetics and Genomics
·
01 Jan 2011
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manual-wu-2011-increased-complexity
Co-Variation Among Major Classes of LRR-Encoding Genes in Two Pairs of Plant Species
J Mol Evol
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01 Jan 2011
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manual-wang-2011-co-variation
Unusual signatures of highly adaptable R-loci in closely-related Arabidopsis species
Gene
·
01 Jan 2011
·
manual-wang-2011-unusual-signatures
Adaptive evolution of Xa21 homologs in gramineae
Genteica
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01 Jan 2011
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manual-tan-2011-adaptive-evolution
2010
Disease resistance signature of the leucine-rich repeat receptor-like kinase genes in four plant species
Plant Sci
·
01 Jan 2010
·
manual-tang-2010-disease-resistance-signature
Strong positive selection drives rapid diversification of R-genes in Arabidopsis relatives
J Mol Evol
·
01 Jan 2010
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manual-chen-2010-strong-positive-selection
Unique pattern of number evolution in gramineous NBS-LRR genes
Mol Genet Genomics
·
01 Jan 2010
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manual-li-2010-unique-pattern-number
Genome-wide investigation reveals high evolutionary rates in annual plants
BMC Plant Biol
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01 Jan 2010
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manual-yue-2010-genome-wide-investigation
Important role of indels in somatic mutations of human cancer genes
BMC Med Genet
·
01 Jan 2010
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manual-yang-2010-important-role-indels
Avoidance of long mononucleotide repeats in codon pair usage
Genetics
·
01 Jan 2010
·
manual-gu-2010-avoidance-repeats
2009
Evolutionary pattern of protein architecture in mammal and fruit fly genomes
Genomics
·
01 Jan 2009
·
manual-yang-2009-evolutionary-pattern
Patterns of exon-intron architecture variation of genes in eukaryotic genomes
BMC Genomics
·
01 Jan 2009
·
manual-zhu-2009-patterns-exon-intron
Genetic signature of rice domestication shown by a variety of genes
J Mol Evol
·
01 Jan 2009
·
manual-zhang-2009-genetic-signature
Variation in the ratio of nucleotide substitution and indel rates across genomes in mammals and bacteria
Mol Biol Evol
·
01 Jan 2009
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manual-chen-2009-variation-ratio
Genome-wide association between insertions/deletions and the nucleotide diversity in bacteria
Mol Biol Evol
·
01 Jan 2009
·
manual-zhu-2009-genome-wide
2008
Grouped nucleotide polymorphism: A major contributor to genetic variation in Arabidopsis
Gene
·
01 Jan 2008
·
manual-du-2008-grouped-nucleotide
Recent duplication dominates the expansion of the NBS-encoding genes in two woody species
Mol Genet Genomics
·
01 Jan 2008
·
manual-yang-2008-recent-duplication
The pattern of insertion/deletion polymorphism in Arabidopsis thaliana
Mol Genet Genomics
·
01 Jan 2008
·
manual-zhang-2008-pattern-insertion
Genetic variation of NBS-LRR class resistance genes in rice lines
Theor Appl Genet
·
01 Jan 2008
·
manual-yang-2008-genetic-variation
Insertion DNA promotes ectopic recombination during meiosis in Arabidopsis
Mol Biol Evol
·
01 Jan 2008
·
manual-sun-2008-insertion-dna
Single-nucleotide mutation rate increases close to indels in eukaryotes
Nature
·
01 Jan 2008
·
manual-tian-2008-singlenucleotide-mutation
2007
Pattern of LRR nucleotide variation in plant resistance genes
Plant Science
·
01 Jan 2007
·
manual-jiang-2007-pattern-lrr
Highly asymmetric rice genomes
BMC Genomics
·
01 Jan 2007
·
manual-ding-2007-highly-asymmetric
Contrasting patterns of evolution between allelic groups at a single locus in Arabidopsis
Genetica
·
01 Jan 2007
·
manual-ding-2007-contrasting-patterns
A molecular isolation mechanism associated with high intra-specific diversity in rice
Gene
·
01 Jan 2007
·
manual-yang-2007-molecular-isolation
Unique pattern of R-gene variation within populations in Arabidopsis
Mol Genet Genomics
·
01 Jan 2007
·
manual-ding-2007-unique-pattern
2006
Genome-wide investigation on the genetic variations of rice disease resistance genes
Plant Mol Biol
·
01 Jan 2006
·
manual-yang-2006-genome-wide-investigation
Unique evolutionary mechanism in R-genes under the presence/absence polymorphism in Arabidopsis thaliana
Genetics
·
01 Jan 2006
·
manual-shen-2006-unique-evolutionary-mechanism
Presence/absence polymorphism for alternative pathogenicity islands in Pseudomonas viridiflava, a pathogen of Arabidopsis
Proc Natl Acad Sci
·
01 Jan 2006
·
manual-arakai-2006-presence-absence
2004
Genome-wide identification of NBS genes in rice reveals significant expansion of divergent non-TIR NBS Genes
Mol Genet Genomics
·
01 Jan 2004
·
manual-zhou-2004-genome-wide-identification
2003
Natural selection for polymorphism in the disease resistance gene RPS2 of Arabidopsis
Genetics
·
01 Jan 2003
·
manual-mauricio-2003-natural-selection
Fitness cost of R-gene mediated resistance in Arabidopsis thaliana
Nature
·
01 Jan 2003
·
manual-tian-2003-fitness-cost
2002
DNA transfer by highly asymmetric somatic hybridisation in Medicago truncatula x Medicago rugosa and Medicago truncatula x Medicago scutellata
Theo Appl Genet
·
01 Jan 2002
·
manual-tian-2002-dna-transfer
Signature of balancing selection in Arabidopsis
Proc Natl Acad Sci
·
01 Jan 2002
·
manual-tian-2002-signature-balancing
2001
Evolutionary dynamics of plant R-genes
Science
·
01 Jan 2001
·
manual-bergelson-2001-evolutionary-dynamics
1999
Plant regeneration of asymmetric somatic hybrids between annual Medicago truncatula and Medicago scutellata
Plant Cell Report
·
01 Jan 1999
·
manual-tian-1999-plant-regeneration
1994
杂交水稻制种高产栽培技术
四川科技出版社
·
01 Jan 1994
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manual-tian-1994-hybrid-rice-cultivation
1991
水稻异交栽培学
四川科技出版社
·
01 Jan 1991
·
manual-tian-1991-rice-cross-breeding